Include the definitions necessary for the cell system division algorithm and model. More...
#include <config.h>
#include <algorithms/complex.h>
#include <geometry/intersection.h>
#include <geometry/area.h>
#include <util/matrix.h>
#include <model.h>
#include <util/parms.h>
#include <sstream>
#include <algorithms/tissue.h>
#include <storage/storage.h>
#include <storage/complex.h>
#include <iostream>
Go to the source code of this file.
Classes | |
class | cell_system::CellSystem< Complex, MyModel > |
Full cell-system model. More... | |
class | cell_system::CellSystemCell |
Content of a vertex for the 2D cell system. More... | |
class | cell_system::CellSystemDivisionParams |
Parameters for cell-system division. More... | |
class | cell_system::CellSystemJunction |
Content of a vertex for the 2D cell system. More... | |
class | cell_system::DivisionParams |
Structure storing the right hand side of a division rule. More... | |
Namespaces | |
namespace | cell_system |
Namespace defining the cell system division algorithm and model. | |
Defines | |
#define | EPSILON 0.00001 |
Typedefs | |
typedef int | cell_system::label_t |
Type of the label of a cell (for full cell-system only). | |
Functions | |
template<class Complex > | |
DivisionData< typename Complex::junction_content > | cell_system::findDivisionPoints (const typename Complex::cell &c, Complex &T, const CellSystemDivisionParams ¶ms) |
Division algorithm for cell-system. | |
template<class Complex > | |
DivisionData< typename Complex::junction_content > | cell_system::findDivisionPoints (const typename Complex::cell &c, Point3d ¢er, Complex &T, const Point3d &direction) |
Find the division points for a wall going through a given point. | |
std::string | cell_system::removeWhitespace (std::string s) |
Convenience function that removes white spaces before and after the string. | |
template<class Complex > | |
double | cell_system::volumeLeftCell (const typename Complex::cell &c, Complex &T, const Point3d ¢er, const DivisionData< typename Complex::junction_content > &result) |
Compute the volume of the left cell of a division. |
Include the definitions necessary for the cell system division algorithm and model.
Definition in file cellsystem.h.