tissue.h File Reference

Definition of the tissue algorithm. More...

#include <config.h>
#include <algorithms/complex.h>
#include <geometry/geometry.h>

Go to the source code of this file.

Classes

struct  tissue::CellPinchingParams
 Parameters of the cell pinching algorithm. More...
struct  tissue::ClosestMidAlgoParams
 Parameters for the closest mid. More...
struct  tissue::ClosestWallAlgoParams
 Parameters for the closest wall algorithm. More...
struct  tissue::ShortWallAlgoParams
 Parameters for the shortest wall algorithm. More...
class  tissue::Tissue< Model, CellContent, JunctionContent, WallContent, CellEdgeContent, CellJunctionContent, JunctionCellContent, compact, LeafClass >
 Class handling the development and representation of a cell tissue. More...

Namespaces

namespace  tissue
 

The tissue module handle cell division in a cell tissue.


Typedefs

typedef Tissue::cell_graph tissue::cell_graph
 Documentation alias for the type of the cell graph.
typedef Tissue::tissue_graph tissue::tissue_graph
 Documentation alias for the type of the tissue graph.
typedef Tissue::vertex tissue::vertex
 Documentation alias for the type of a graph vertex.

Enumerations

enum  tissue::CELL_DIVISION_ALGORITHM { CLOSEST_MID, SHORT_WALL, CLOSEST_WALL }
 

Enumeration of the provided division algorithms.

More...

Functions

template<class Complex >
void tissue::cellPinching (const typename Complex::cell &c, Complex &T, DivisionData< typename Complex::junction_content > &data, const CellPinchingParams &params)
 Pinching algorithm.
template<class Complex >
DivisionData< typename
Complex::junction_content > 
tissue::findDivisionPoints (const typename Complex::cell &c, Complex &T, const ClosestWallAlgoParams &params)
 Implementation of the closest wall algorithm.
template<class Complex >
DivisionData< typename
Complex::junction_content > 
tissue::findDivisionPoints (const typename Complex::cell &c, Complex &T, const ClosestMidAlgoParams &params)
 Implementation of the closest mid algorithm.
template<class Complex >
DivisionData< typename
Complex::junction_content > 
tissue::findDivisionPoints (const typename Complex::cell &c, Complex &T, const ShortWallAlgoParams &params)
 Implementation of the shortest wall algorithm.

Detailed Description

Definition of the tissue algorithm.

Definition in file tissue.h.

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